catcheR_scicatchQC - Fine-tune iPS2-sci-seq perturbation assignmentΒΆ

  1. Run catcheR_scicatchQC() following the same steps described for catcheR_10XcatchQC() (see par-SPFourParThree). The two functions share the same arguments and outputs, but catcheR_scicatchQC() uses the outputs from catcheR_scicatch().

catcheR_scicatchQC(
    group = "docker",
    folder = "path/to/working/folder",
    mode = "noise")